This project contains the data and code for analyzing raw data and generating figures for the manuscript "Maximizing protein production by keeping cells at optimal secretory stress levels using real-time control approaches" by Sosa-Carrillo and colleagues. The repository is composed of four folders: code, analysis_figures, data, and plasmids. The code makes use of several packages including Pandas, NumPy, SciPy, sklearn, matplotlib, and cma.